CDS

Accession Number TCMCG006C101230
gbkey CDS
Protein Id XP_013666766.1
Location complement(join(84218..84249,85631..85715,85795..85869,86109..86264,86394..86456,86563..86763,86893..86994,87112..87263,87366..87435,87523..87636,87892..87945))
Gene LOC106371267
GeneID 106371267
Organism Brassica napus

Protein

Length 367aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013811312.2
Definition SH3 domain-containing protein 2-like isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category T
Description Variant SH3 domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K11247        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0000278        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000281        [VIEW IN EMBL-EBI]
GO:0000910        [VIEW IN EMBL-EBI]
GO:0000911        [VIEW IN EMBL-EBI]
GO:0000919        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006897        [VIEW IN EMBL-EBI]
GO:0006898        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009504        [VIEW IN EMBL-EBI]
GO:0009832        [VIEW IN EMBL-EBI]
GO:0009920        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032506        [VIEW IN EMBL-EBI]
GO:0042546        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0061640        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071669        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072583        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098657        [VIEW IN EMBL-EBI]
GO:0140014        [VIEW IN EMBL-EBI]
GO:1902410        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGCATTAAGAAAACAAGCCAGCAGGATCAGGGAACAAGTCGCAAGACAGGCTGTCTTCAAGCAATTTGGAGGAGGAGGACATGGCTCTGGTTTATCGGATGATGCCGAACTCCATCAGCATCAGAAACTAGAAAAGCTTTACATATCCACCCGTGCTGCCAAGCATTACCAAAGAGATATTGTTCGTGGCGTGGAAGGTTATATAGTCACCGGTTCAAAACAAGTTGAAATTGGGACGAAGCTCTCTGAGGATAGCAGGAAGTATGGTTCAGAGAACACATGTACAAATGGTAACGTATTAACAAGGGCTGCACTGAGCTACGGACGTGCTCGGGCGCAAATGGAGCAGGAGCGTGGAAATATATTGAAGGCTCTTGGTACACAGGTTGCTGAGCCATTACGGGCAATGGTCTTGGGAGCTCCACTGGAAGATGCTAGACATCTTGCTCAACGTTATGACAGAATGCGCCAAGAAGCTGAAGCTCAGGCTACAGAAGTTGCCAGACGCCAAGCAAAGGCGAGAGAGTCTCAAGGCAATCCTGACATATTCATGAAACTTGAATCTGCTGATGCAAAACTTCAAGACCTGAAGTCAAATATGAGTATATTGGGGAAGGAAGCCGCTTCTGCTTTATCTTCCGTTGAAGATCAACAACAAAAACTGACTCTTGAACGACTTATTTCAATGGTTGAATCCGAACGTGGCTACCATCAAAGAGTCCTCCAAATACTTGATCAGCTAGAAGGAGAGATGGTATCTGAGAGGCAACGTATTGAAGCCCCCACTACTCCCTCGAGTACAGACAATATGCCGCCGCCACCATCATATGAGGAAGCGAATGGAGTGTTTGCATCATCTCACATGCATGCCACGCCAACAGATAGCATGAGTTACTTCTTAGGAGAGGTCTTGTTCCCATATCACGGTGTGACAAATGTCGAGCTAAGCTTATCAACTGGTGAACACGTTGTTGTTAGAAAGGTAACAGGCAGCGGATGGGCAGAAGGTGAATGCAAAGGCAAAGCGGGTTGGTTCCCTTATGAGTACATTGAAAGACGGGAACGAGTTCTTGCTAGCAAAGTCTCTGAAGTCTTTTGA
Protein:  
MDALRKQASRIREQVARQAVFKQFGGGGHGSGLSDDAELHQHQKLEKLYISTRAAKHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGSENTCTNGNVLTRAALSYGRARAQMEQERGNILKALGTQVAEPLRAMVLGAPLEDARHLAQRYDRMRQEAEAQATEVARRQAKARESQGNPDIFMKLESADAKLQDLKSNMSILGKEAASALSSVEDQQQKLTLERLISMVESERGYHQRVLQILDQLEGEMVSERQRIEAPTTPSSTDNMPPPPSYEEANGVFASSHMHATPTDSMSYFLGEVLFPYHGVTNVELSLSTGEHVVVRKVTGSGWAEGECKGKAGWFPYEYIERRERVLASKVSEVF